# ChangeLog for dev-lang/R # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/dev-lang/R/ChangeLog,v 1.245 2015/05/01 13:35:41 gienah Exp $ *R-3.2.0-r1 (01 May 2015) 01 May 2015; Mark Wright +R-3.2.0-r1.ebuild, +files/R-3.2.0-omitted-extern-R_running_as_main_program.patch, -R-3.2.0.ebuild: Fix bug 547478 upstream R bug https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=15899 thanks to Kobboi for reporting. Revbump R-3.2.0 to R-3.2.0-r1 dropping the broken R-3.2.0 to force the upgrade of R. *R-3.2.0 (21 Apr 2015) 21 Apr 2015; Denis Dupeyron +R-3.2.0.ebuild: Version bump, bug #547050. 07 Apr 2015; Justin Lecher R-3.0.1.ebuild: Fix Slot operators 07 Feb 2015; Andreas K. Huettel R-3.0.1.ebuild: Add slot operator on icu dependency *R-3.1.2 (03 Nov 2014) 03 Nov 2014; Denis Dupeyron +R-3.1.2.ebuild: Version bump, thanks to Grischa Toedt (bug #527834). 01 Sep 2014; Michał Górny R-3.0.3.ebuild, R-3.1.0.ebuild, R-3.1.1.ebuild: Remove := subslot operator from || () block since it is meaningless and broken. 28 Aug 2014; Michał Górny R-3.1.1.ebuild: Remove USE=bash-completion, install the completion file unconditionally following the Council decision. *R-3.1.1 (28 Jul 2014) 28 Jul 2014; Denis Dupeyron +R-3.1.1.ebuild: Version bump, bug #517098. 16 Apr 2014; Sébastien Fabbro R-3.0.1.ebuild, R-3.0.3.ebuild, R-3.1.0.ebuild: Do not compress NEWS.rds, bug #507800, thanks Bernd Feige *R-3.1.0 (15 Apr 2014) 15 Apr 2014; Sébastien Fabbro +R-3.1.0.ebuild, -R-3.0.1-r1.ebuild, -R-3.0.2.ebuild: Version bump 07 Apr 2014; Benda Xu R-3.0.2.ebuild, R-3.0.3.ebuild: bug 505904 by Robert McGehee: revert the blas library configure update for bug 499356. I missunderstood the purpose of this option. 19 Mar 2014; Sébastien Fabbro R-3.0.3.ebuild: Re-added the autoconf since we modify the configure.ac *R-3.0.3 (19 Mar 2014) 19 Mar 2014; Sébastien Fabbro +R-3.0.3.ebuild, R-3.0.1-r1.ebuild, files/R-2.11.1-parallel.patch, files/R-2.13.1-zlib_header_fix.patch, files/R-3.0.0-rmath-shared.patch: Version bump 02 Mar 2014; Andreas K. Huettel R-3.0.2.ebuild: Add subslot dependency on dev-libs/icu 17 Feb 2014; Benda Xu R-3.0.2.ebuild: Pass correct blas path to configure, pass {tk,tcl}-config scripts to configure explicitly for Prefix. Credits to Michael Schubert, bug 499356. 15 Jan 2014; Justin Lecher -R-2.10.1.ebuild, -R-2.15.3.ebuild: Drop old; fixes #478572 (EAPI <4 should be removed), #476010 & #476008 (Respect AR and LDFLAGS), #438544 (Installation Problems with version 2), #425708 (stack smashing) 15 Jan 2014; Agostino Sarubbo R-3.0.1.ebuild: Stable for ia64, wrt bug #437508 22 Dec 2013; Agostino Sarubbo R-3.0.1.ebuild: Stable for ppc64, wrt bug #437508 21 Dec 2013; Agostino Sarubbo R-3.0.1.ebuild: Stable for ppc, wrt bug #437508 13 Dec 2013; Agostino Sarubbo R-3.0.1.ebuild: Stable for sparc, wrt bug #437508 03 Nov 2013; Matt Turner R-2.10.1.ebuild, R-2.15.3.ebuild, R-3.0.1-r1.ebuild, R-3.0.1.ebuild, R-3.0.2.ebuild: Dropped alpha keywords, bug 437508. 30 Sep 2013; Agostino Sarubbo R-3.0.1.ebuild: Stable for x86, wrt bug #437508 28 Sep 2013; Agostino Sarubbo R-3.0.1.ebuild: Stable for amd64, wrt bug #437508 27 Sep 2013; Patrick Lauer R-3.0.2.ebuild: Fix realpath dependency for #486086 26 Sep 2013; Jeroen Roovers R-3.0.1.ebuild: Stable for HPPA (bug #437508). *R-3.0.2 (26 Sep 2013) 26 Sep 2013; Justin Lecher +R-3.0.2.ebuild, metadata.xml: Version Bump, #486064 *R-3.0.1-r1 (24 Sep 2013) 24 Sep 2013; Sébastien Fabbro +R-3.0.1-r1.ebuild, -R-2.15.2-r2.ebuild, -R-2.15.2.ebuild, -R-3.0.0.ebuild, -files/R-2.14.1-tiff.patch, -files/R-2.14.1-warnings-buffer-overflow.patch, -files/R-2.15.2-cairo.patch, R-3.0.1.ebuild, metadata.xml: Use R blas internals to pass tests for stable candidate (it does work with other blas than blas-reference), remove old 27 Aug 2013; Michael Palimaka R-2.10.1.ebuild, R-2.15.2-r2.ebuild, R-2.15.2.ebuild, R-2.15.3.ebuild, R-3.0.0.ebuild, R-3.0.1.ebuild: Pin virtual/jpeg SLOT to 0. *R-3.0.1 (23 May 2013) 23 May 2013; Justin Lecher +R-3.0.1.ebuild: Version Bump, #470858 10 Apr 2013; Patrick Lauer R-3.0.0.ebuild: Force emake install to -j1 to avoid spurious failures #465352 *R-3.0.0 (04 Apr 2013) 04 Apr 2013; Denis Dupeyron +R-3.0.0.ebuild, +files/R-3.0.0-rmath-shared.patch: Version bump. *R-2.15.3 (04 Mar 2013) 04 Mar 2013; Sébastien Fabbro +R-2.15.3.ebuild: Version bump 19 Feb 2013; Justin Lecher R-2.10.1.ebuild, R-2.15.2.ebuild, metadata.xml: Use tc-getPKG_CONFIG from toolchain-funcs.eclass instead of plain pkg-config 18 Feb 2013; Denis Dupeyron R-2.15.2-r2.ebuild: Fix ar being called directly (bug #457758). *R-2.15.2-r2 (13 Feb 2013) 13 Feb 2013; Denis Dupeyron -R-2.15.2-r1.ebuild, +R-2.15.2-r2.ebuild: Fix R_HOME warning when R is started up. 29 Jan 2013; Sébastien Fabbro R-2.15.2-r1.ebuild: Fixed bash completion spaces (bug #417951, thanks Marco Poletti) and parallel build (bug #395403) *R-2.15.2-r1 (28 Jan 2013) 28 Jan 2013; Sébastien Fabbro +R-2.15.2-r1.ebuild, +files/R-2.15.2-cairo.patch, -R-2.14.1.ebuild, -R-2.14.2.ebuild, -R-2.15.0.ebuild, -R-2.15.1.ebuild, -files/R-2.14.1-pcre830.patch, -files/R-2.14.2-library-writability.patch, -files/R-2.14.2-prune-package-update.patch, metadata.xml: Fixed for cairo graphics (bug #453048), use generic pkg-config, make sure Rexec links to libR.so on prefix. Removed old. *R-2.15.2 (26 Oct 2012) 26 Oct 2012; Denis Dupeyron +R-2.15.2.ebuild: Version bump. 07 Oct 2012; Justin Lecher R-2.10.1.ebuild, R-2.14.2.ebuild, R-2.15.0.ebuild, R-2.15.1.ebuild, metadata.xml: virtual/fortran is now in *DEPEND of fortran-2.eclass 04 Jul 2012; Sébastien Fabbro R-2.15.1.ebuild: keyword amd64-linux, x86-linux, x64-darwin, added prefix stuff for darwin *R-2.15.1 (29 Jun 2012) 29 Jun 2012; Denis Dupeyron +R-2.15.1.ebuild: Version bump. 22 Jun 2012; Denis Dupeyron R-2.15.0.ebuild: Removed debugging code which stayed behind by mistake. Many thanks to Gabriel Marcano in bug #419761. 20 Jun 2012; Denis Dupeyron R-2.15.0.ebuild: Fix bug #419761 19 Jun 2012; Sébastien Fabbro R-2.15.0.ebuild: commented patches with upstream reports 19 Jun 2012; Sébastien Fabbro R-2.15.0.ebuild: Update bash completion file with newer one and fix installation 06 Jun 2012; Zac Medico R-2.10.1.ebuild, R-2.14.1.ebuild, R-2.14.2.ebuild, R-2.15.0.ebuild: inherit multilib for get_libdir 03 May 2012; Jeff Horelick R-2.10.1.ebuild, R-2.14.1.ebuild, R-2.14.2.ebuild, R-2.15.0.ebuild: dev-util/pkgconfig -> virtual/pkgconfig *R-2.15.0 (30 Mar 2012) 30 Mar 2012; Denis Dupeyron +R-2.15.0.ebuild: Version bump. *R-2.14.2 (05 Mar 2012) 05 Mar 2012; Denis Dupeyron +R-2.14.2.ebuild, +files/R-2.14.2-library-writability.patch, +files/R-2.14.2-prune-package-update.patch, metadata.xml: Version bump. Add patches to fix handling of library writability and package updates. 27 Feb 2012; Sébastien Fabbro R-2.14.1.ebuild, +files/R-2.14.1-warnings-buffer-overflow.patch: Fixed crash caused by too many warnings, bug #405463, thanks Sebastian Luther 09 Feb 2012; Sébastien Fabbro R-2.14.1.ebuild, +files/R-2.14.1-pcre830.patch: Fixed for pcre-8.30, thanks Rainer 'Siju' Sigl for his initial work 06 Feb 2012; Sébastien Fabbro R-2.14.1.ebuild, files/R-2.14.1-tiff.patch: Fixed libtiff syntax in patch (bug #402327), remove bash_completion_post_install (bug #402329) *R-2.14.1 (02 Jan 2012) 02 Jan 2012; Sébastien Fabbro files/R-2.11.1-parallel.patch, files/R-2.12.1-ldflags.patch, -R-2.13.0.ebuild, -R-2.13.1-r1.ebuild, files/R-2.13.1-zlib_header_fix.patch, -R-2.14.0.ebuild, +R-2.14.1.ebuild, +files/R-2.14.1-rmath-shared.patch, +files/R-2.14.1-tiff.patch: Version bump. Fixed automagic dependencies on icu and tiff. Added required dependency on pango when cairo is set. Fixed as-needed on standalone math library. Added required use flags for graphics capabilities (bug #373649). Removed glibc hacks, applied on glibc package. Commented patches for another attempt to submit them upstream. Removed older unstable versions, fixing bugs #353545, bug #357077, bug #382687, bug #384493, bug #384723. *R-2.14.0 (21 Nov 2011) 21 Nov 2011; Justin Lecher R-2.10.1.ebuild, -R-2.12.1.ebuild, -R-2.12.2.ebuild, R-2.13.0.ebuild, R-2.13.1-r1.ebuild, +R-2.14.0.ebuild, metadata.xml: Version Bump, #391045, cleaned old, moved to bashcompletion-r1.eclass, sorted minor things in ebuild (adopt changes in between versions) 17 Oct 2011; Samuli Suominen R-2.10.1.ebuild: Fix building with libpng15 wrt #366223. Fix building with sys-libs/zlib >= 1.2.5.1-r1 (OF). 05 Oct 2011; Alexis Ballier R-2.10.1.ebuild, R-2.12.1.ebuild, R-2.12.2.ebuild, R-2.13.0.ebuild, R-2.13.1-r1.ebuild: remove ptex dep as it is going away *R-2.13.1-r1 (25 Sep 2011) 25 Sep 2011; Steve Arnold -R-2.13.1.ebuild, +R-2.13.1-r1.ebuild, +files/R-2.13.1-zlib_header_fix.patch: Updated for zlib header changes (closes bug #383431). 04 Aug 2011; Naohiro Aota R-2.13.1.ebuild: Fix dependency for FreeBSD. We have rpc related functions in freebsd-lib. *R-2.13.1 (20 Jul 2011) 20 Jul 2011; Sébastien Fabbro +R-2.13.1.ebuild: Version bump. Added fix for glibc-2.14 (bug #373051). Fixed missing libs during linking libRmath (bug #359249). More EAPI4 simplifications. *R-2.13.0 (23 Jun 2011) 23 Jun 2011; Justin Lecher R-2.10.1.ebuild, R-2.12.1.ebuild, R-2.12.2.ebuild, +R-2.13.0.ebuild: Version Bump, #372197 22 Jun 2011; Justin Lecher R-2.10.1.ebuild, R-2.12.1.ebuild, R-2.12.2.ebuild: Added fortran-2.eclass support *R-2.12.2 (01 Mar 2011) 01 Mar 2011; Sébastien Fabbro +R-2.12.2.ebuild: Version bump. Switched to EAPI3. 04 Jan 2011; Sébastien Fabbro R-2.12.1.ebuild: Profiling is now turn on with a use flag *R-2.12.1 (22 Dec 2010) 22 Dec 2010; Sébastien Fabbro -R-2.12.0.ebuild, +R-2.12.1.ebuild, +files/R-2.12.1-ldflags.patch: Version bump. This fix some test failures as well 08 Nov 2010; Kacper Kowalik R-2.10.1.ebuild, -R-2.11.1.ebuild, R-2.12.0.ebuild: media-libs/jpeg -> virtual/jpeg. Drop old. *R-2.12.0 (25 Oct 2010) 25 Oct 2010; Sébastien Fabbro +R-2.12.0.ebuild: Version bump 16 Jun 2010; Sébastien Fabbro -R-2.11.0.ebuild, R-2.11.1.ebuild, +files/R-2.11.1-parallel.patch: Fix occasional failures with parallel install, bug #322965 *R-2.11.1 (01 Jun 2010) 01 Jun 2010; Sébastien Fabbro +R-2.11.1.ebuild: Version bump 25 May 2010; Sébastien Fabbro -files/R-2.7.1-test-fix.patch, -R-2.9.2.ebuild, -files/R-javareconf.patch: Removed old, does not access docs, fixing bug #305641 23 May 2010; Pacho Ramos R-2.10.1.ebuild: stable amd64, bug 306747 13 May 2010; Joseph Jezak R-2.10.1.ebuild: Marked ppc stable for bug #306747. *R-2.11.0 (28 Apr 2010) 28 Apr 2010; Sébastien Fabbro -R-2.7.2.ebuild, -R-2.8.1.ebuild, -R-2.10.0.ebuild, +R-2.11.0.ebuild: Version bump 16 Apr 2010; Raúl Porcel R-2.10.1.ebuild: alpha/ia64/sparc stable wrt #306747 02 Apr 2010; Jeroen Roovers R-2.10.1.ebuild: Stable for HPPA (bug #306747). 23 Mar 2010; Brent Baude R-2.10.1.ebuild: stable ppc64, bug 306747 21 Mar 2010; Pawel Hajdan jr R-2.10.1.ebuild: x86 stable wrt bug #306747 18 Mar 2010; Sébastien Fabbro R-2.10.1.ebuild: Restricting test when minimal flag is on (upstream recommendation), some ebuild cleaning 26 Dec 2009; Peter Volkov R-2.7.2.ebuild, R-2.8.1.ebuild, R-2.9.2.ebuild, R-2.10.0.ebuild, R-2.10.1.ebuild: virtual/ghostscript->app-text/ghostscript-gpl: ghostscript-gpl is the only implementation left in the tree. *R-2.10.1 (14 Dec 2009) 14 Dec 2009; Sébastien Fabbro -R-2.9.1.ebuild, +R-2.10.1.ebuild: Version bump 18 Nov 2009; Brent Baude R-2.9.2.ebuild: Marking R-2.9.2 ppc64 for bug 289381 *R-2.10.0 (03 Nov 2009) 03 Nov 2009; Sébastien Fabbro +R-2.10.0.ebuild: Version bump 03 Nov 2009; Raúl Porcel R-2.9.2.ebuild: ia64 stable wrt #289381 29 Oct 2009; Markus Meier R-2.9.2.ebuild: amd64/x86 stable, bug #289381 27 Oct 2009; Tobias Klausmann R-2.9.2.ebuild: Stable on alpha, bug #289381 26 Oct 2009; Jeroen Roovers R-2.9.2.ebuild: Stable for SPARC (bug #289381). 25 Oct 2009; Jeroen Roovers R-2.9.2.ebuild: Stable for HPPA (bug #289381). 24 Oct 2009; nixnut R-2.9.2.ebuild: ppc stable #289381 *R-2.9.2 (08 Sep 2009) 08 Sep 2009; Sébastien Fabbro +R-2.9.2.ebuild: Version bump 07 Aug 2009; Sébastien Fabbro R-2.7.2.ebuild, R-2.8.1.ebuild, -R-2.9.0.ebuild, -files/R-2.9.0-without-x.patch, R-2.9.1.ebuild: Fixed perl 5 path, thanks to Guenther Brunthaler, closing bug #278258 16 Jul 2009; Sébastien Fabbro R-2.9.1.ebuild: Added symlinking for docs, thanks to Martin von Gagern, closing bug #273957 *R-2.9.1 (07 Jul 2009) 07 Jul 2009; Sébastien Fabbro R-2.9.0.ebuild, +files/R-2.9.0-without-x.patch, +R-2.9.1.ebuild: Bump and fixed bug #268362 (thanks Andrew Savchenko) and bug #269511 30 May 2009; Ulrich Mueller R-2.7.2.ebuild, R-2.8.1.ebuild, R-2.9.0.ebuild: Remove app-text/tetex from dependencies, bug 227443. 23 Apr 2009; Raúl Porcel R-2.8.1.ebuild: ia64 stable wrt #265338 *R-2.9.0 (21 Apr 2009) 21 Apr 2009; Sébastien Fabbro -R-2.7.1.ebuild, +R-2.9.0.ebuild: Bump 18 Apr 2009; Markus Meier R-2.8.1: amd64/x86 stable, bug #265338 15 Apr 2009; Brent Baude R-2.7.2.ebuild, R-2.8.1.ebuild: Marking R-2.7.2 | 2.8.1 ppc64 stable for bugs 244621 and 265338 respectively 12 Apr 2009; Tobias Klausmann R-2.8.1.ebuild: Stable on alpha, bug #265338 11 Apr 2009; nixnut R-2.8.1.ebuild: ppc stable #265338 10 Apr 2009; Jeroen Roovers R-2.8.1.ebuild: Stable for HPPA (bug #265338). 07 Apr 2009; Ferris McCormick R-2.8.1.ebuild: Sparc stable, Bug #265338. 29 Jan 2009; Sébastien Fabbro -files/R-2.8.0-without-X.patch, R-2.7.2.ebuild, -R-2.8.0.ebuild, R-2.8.1.ebuild: Move 2.7.2 to EAPI=2 and close bug #252661 *R-2.8.1 (02 Jan 2009) 02 Jan 2009; Markus Dittrich +R-2.8.1.ebuild: Version bump (fixes bug #253117). 09 Nov 2008; nixnut R-2.7.2.ebuild: Stable on ppc wrt bug 244621 31 Oct 2008; Markus Dittrich +files/R-2.8.0-without-X.patch, R-2.8.0.ebuild: Fixed bug in source code preventing building with USE="-X" (see bug #245027). Thanks much to Andrew Savchenko for his patch. 30 Oct 2008; Raúl Porcel R-2.7.2.ebuild: alpha/ia64 stable #244621 28 Oct 2008; Jeroen Roovers R-2.7.2.ebuild: Stable for HPPA (bug #244621). 27 Oct 2008; Markus Meier R-2.7.2.ebuild: amd64/x86 stable, bug #244621 27 Oct 2008; Ferris McCormick R-2.7.2.ebuild: Sparc stable --- Bug #244621 --- has been around for 2 months. *R-2.8.0 (27 Oct 2008) 27 Oct 2008; Sébastien Fabbro R-2.7.1.ebuild, R-2.7.2.ebuild, +R-2.8.0.ebuild: Version bump and get rid of virtual/tetex 07 Oct 2008; Sébastien Fabbro metadata.xml, -R-2.2.1-r1.ebuild, -R-2.6.1-r1.ebuild, R-2.7.2.ebuild: Added soname to libRmath, closing bug #235830. Changed herd from sci to sci-mathematics. Removed older versions. 06 Sep 2008; Tobias Scherbaum R-2.7.1.ebuild: ppc stable, bug #235822 02 Sep 2008; Tobias Heinlein R-2.7.1.ebuild: amd64 stable wrt security bug #235822 02 Sep 2008; Jeroen Roovers R-2.7.1.ebuild: Stable for HPPA (bug #235822). 01 Sep 2008; Raúl Porcel R-2.7.1.ebuild: alpha/ia64/x86 stable wrt #235822 01 Sep 2008; Markus Rothe R-2.7.1.ebuild: Stable on ppc64; bug #235822 31 Aug 2008; Ferris McCormick R-2.7.1.ebuild: Sparc stable, security Bug #235822. 31 Aug 2008; Markus Dittrich files/R-javareconf.patch: Re-added R-javareconf.patch description. 31 Aug 2008; Markus Dittrich files/R-javareconf.patch: Added further enhancements to R-javareconf.patch (see bug #235822). *R-2.7.2 (27 Aug 2008) 27 Aug 2008; Markus Dittrich +files/R-javareconf.patch, +files/R-2.7.1-test-fix.patch, -2.6.1-r1.ebuild, -R-2.6.2.ebuild, -R-2.7.0.ebuild, R-2.7.1.ebuild, +R-2.7.2.ebuild: Added patch from Debian to fix insecure tempfile handling in javareconf (fixes bug #235822). NOTE: R-2.2.1-r1.ebuild is not vulnerable since it does not include the javereconf script. Also removed old ebuilds and removed two tests from the test suite since they fail with portage. 18 Jul 2008; Markus Dittrich R-2.7.1.ebuild: Added missing cairo use flag (see bug #231970). *R-2.7.1 (10 Jul 2008) 10 Jul 2008; Sébastien Fabbro +R-2.7.1.ebuild: Version bump. Removed std=gnu99, added upstream. 10 May 2008; Markus Dittrich R-2.7.0.ebuild: Fixed improper binary path in Rscript (see bug #221061). *R-2.7.0 (23 Apr 2008) 23 Apr 2008; Markus Dittrich +R-2.7.0.ebuild: Version bump. 15 Apr 2008; Raúl Porcel R-2.6.1-r1.ebuild: alpha stable 26 Feb 2008; Sébastien Fabbro +R-2.2.1-r1.ebuild: Re-add old R-2.2.1-r1.ebuild for old rpy dependency until rpy-1.0.1 is stable 26 Feb 2008; Sébastien Fabbro -R-2.2.1-r1.ebuild, -R-2.6.1.ebuild, R-2.6.1-r1.ebuild, R-2.6.2.ebuild: Removed older versions, and duplicate license files (see bug #211534) 19 Feb 2008; Brent Baude R-2.6.1-r1.ebuild: stable ppc64, bug 210229 19 Feb 2008; Markus Dittrich R-2.6.1-r1.ebuild: Added -mminimal-toc on ppc64 to fix linking errors (see bug #210229). 17 Feb 2008; Raúl Porcel R-2.6.1-r1.ebuild: ia64 stable wrt #210229 16 Feb 2008; Markus Meier R-2.6.1-r1.ebuild: x86 stable, bug #210229 15 Feb 2008; nixnut R-2.6.1-r1.ebuild: Stable on ppc wrt bug 210229 15 Feb 2008; Jeroen Roovers R-2.6.1-r1.ebuild: Stable for HPPA (bug #210229). 15 Feb 2008; Santiago M. Mola R-2.6.1-r1.ebuild: amd64 stable wrt bug #210229 15 Feb 2008; Ferris McCormick R-2.6.1-r1.ebuild: Sparc stable, Bug #210229. Working since 18 January. *R-2.6.2 (13 Feb 2008) 13 Feb 2008; Markus Dittrich +R-2.6.2.ebuild: Version bump (fixes bug #209648). 11 Feb 2008; Sébastien Fabbro -R-2.6.0-r1.ebuild, -R-2.6.0-r2.ebuild, R-2.6.1-r1.ebuild: Removed old versions. Added R_HOME environment variable *R-2.6.1-r1 (17 Jan 2008) 17 Jan 2008; Sébastien Fabbro +R-2.6.1-r1.ebuild: Added bash-completion, also install standalone math library, added zip/unzip run dependencies to build R packages, and really fixed docs directory, bug #205103. 16 Jan 2008; Sébastien Fabbro metadata.xml, R-2.6.1.ebuild: Forced blas dependency (bug #176755), fixed documentation directory (bug #205103), more concise descriptions *R-2.6.1 (26 Nov 2007) 26 Nov 2007; Markus Dittrich +R-2.6.1.ebuild: Version bump. *R-2.6.0-r2 (21 Nov 2007) 21 Nov 2007; Sébastien Fabbro -R-2.2.1.ebuild, -R-2.6.0.ebuild, +R-2.6.0-r2.ebuild: Major cleaning of dependencies and ebuild in general, add/remove USE flags making more sense, export pdf and html viewers with xdg-open 21 Nov 2007; Joe Peterson R-2.6.0-r1.ebuild: Add elibtoolize 21 Nov 2007; Joe Peterson R-2.6.0-r1.ebuild: Added ~x86-fbsd keyword (bug #199368) 21 Nov 2007; Raúl Porcel R-2.6.0-r1.ebuild: Add ~alpha/~ia64 wrt #199368 20 Nov 2007; Chris Gianelloni R-2.2.1-r1.ebuild: Stable on amd64 wrt bug #198976. 18 Nov 2007; Jeroen Roovers R-2.6.0-r1.ebuild: Marked ~hppa (bug #199368). 18 Nov 2007; Tobias Scherbaum R-2.2.1-r1.ebuild: ppc stable, bug #198976 18 Nov 2007; Markus Rothe R-2.2.1-r1.ebuild: Stable on ppc64; bug #198976 17 Nov 2007; Raúl Porcel R-2.2.1-r1.ebuild: ia64 stable wrt security #198976 17 Nov 2007; Markus Meier R-2.2.1-r1.ebuild: x86 stable, security bug #198976 15 Nov 2007; Ferris McCormick R-2.2.1-r1.ebuild: Sparc stable, security bug #198976. 15 Nov 2007; Sébastien Fabbro R-2.2.1-r1.ebuild: Oops, reverting to unstable *R-2.6.0-r1 (15 Nov 2007) *R-2.2.1-r1 (15 Nov 2007) 15 Nov 2007; Sébastien Fabbro -files/R.desktop, -files/R-logo.png, metadata.xml, +R-2.2.1-r1.ebuild, -R-2.5.1.ebuild, +R-2.6.0-r1.ebuild: Security fix with pcre (bug #198385), now use system libs. New ebuild on soon to be commited. *R-2.6.0 (06 Oct 2007) 06 Oct 2007; Markus Dittrich -R-2.4.1.ebuild, -R-2.5.0.ebuild, -files/R-2.4.0-as-needed-gentoo.patch, -files/R-2.4.1-as-needed-gentoo.patch, -files/R-2.2.0-ifc-configure.patch, +R-2.6.0.ebuild: Version bump (fixes bug #194767). Also removed obsolete versions and patches. 11 Sep 2007; Markus Dittrich R-2.5.1.ebuild: Fixed messed up paths in libR.pc pkgconfig file (see bug #191986). 22 Jul 2007; Hans de Graaff R-2.2.1.ebuild, R-2.4.1.ebuild, R-2.5.0.ebuild, R-2.5.1.ebuild: Drop virtual/x11 references. *R-2.5.1 (30 Jun 2007) 30 Jun 2007; Markus Dittrich +R-2.5.1.ebuild: Version bump. 11 May 2007; Markus Dittrich R-2.5.0.ebuild: Added gd useflag to allow users to install the GDD module (this fixes bug #177846). Thanks much to Neil for bringing this to our attention. 30 Apr 2007; Markus Dittrich R-2.5.0.ebuild: Fixed improper path in Rscript (closes bug #176546). 27 Apr 2007; Danny van Dyk R-2.5.0.ebuild: Forgot to copy ebuild after final testing. Sandbox violations is fixed now. *R-2.5.0 (27 Apr 2007) 27 Apr 2007; Danny van Dyk +R-2.5.0.ebuild: New version. As-needed patches have been applied upstream. This version can't be build in parallel anymore. 13 Jan 2007; Markus Dittrich -R-2.1.1.ebuild, -R-2.2.0-r1.ebuild, R-2.2.1.ebuild, -R-2.3.0.ebuild, -R-2.3.1.ebuild, -R-2.4.0.ebuild: Removed obsolete ebuilds and finally got rid of the tcltk flag in R-2.2.1 (see bug #17808). *R-2.4.1 (19 Dec 2006) 19 Dec 2006; Markus Dittrich +files/R-2.4.1-as-needed-gentoo.patch, +R-2.4.1.ebuild: New version (fixes bug #158346). 24 Oct 2006; Markus Dittrich +files/R-2.4.0-as-needed-gentoo.patch, R-2.4.0.ebuild: Fixed linking problems with as-needed. See bug #151908. 22 Oct 2006; Markus Dittrich R-2.4.0.ebuild: Append -std=gnu99 to CFLAGS since it is needed to compile several additional R packages via its custom makefile (this fixes bug #152379). Thanks to Aarre Laakso for pointing this out. *R-2.4.0 (05 Oct 2006) 05 Oct 2006; Danny van Dyk +R-2.4.0.ebuild: Added 2.4.0 release. 07 Aug 2006; Ferris McCormick R-2.2.1.ebuild: Stable on sparc --- Bug #135318 --- has been running fine since last January. (But note that on some systems, FEATURES=test fails: Compare Comments 5, 8, 9, 10, and 11.) 28 Jun 2006; Luca Barbato R-2.3.1.ebuild: Made it use -fPIC instead of -fpic 17 Jun 2006; Danny van Dyk R-2.2.1.ebuild: Marked stable on ia64. 10 Jun 2006; Michael Hanselmann R-2.2.1.ebuild: Stable on ppc. 07 Jun 2006; Chris Gianelloni R-2.2.1.ebuild: Stable on x86 wrt bug #135318. 06 Jun 2006; Markus Rothe R-2.2.1.ebuild: Stable on ppc64; bug #135318 02 Jun 2006; Danny van Dyk R-2.1.1.ebuild, R-2.2.0-r1.ebuild, R-2.2.1.ebuild, R-2.3.0.ebuild, R-2.3.1.ebuild: Added inheritance of flag-o-matic for filter-ldflags calls. *R-2.3.1 (02 Jun 2006) 02 Jun 2006; Danny van Dyk R-2.2.1.ebuild, +R-2.3.1.ebuild: Added R-2.3.1. Marked R-2.2.1 stable on amd64. *R-2.3.0 (10 May 2006) 10 May 2006; Danny van Dyk R-2.1.1.ebuild, R-2.2.0-r1.ebuild, R-2.2.1.ebuild, +R-2.3.0.ebuild: Added version 2.3.0: Fixes bug #127818. Added filter for -Bdirect LDFLAG: Fixes bug #122465. 01 Apr 2006; Aron Griffis R-2.2.1.ebuild: Mark 2.2.1 ~ia64 16 Jan 2006; Marcus D. Hanwell R-2.2.1.ebuild: Ported deps for modular X. 16 Jan 2006; Marcus D. Hanwell R-2.2.1.ebuild: Add gfortran to the list of allowed Fortran compilers, closes bug 118147. *R-2.2.1 (03 Jan 2006) 03 Jan 2006; Marcus D. Hanwell +R-2.2.1.ebuild: Version bump, closes bug 115304. *R-2.2.0-r1 (12 Dec 2005) 12 Dec 2005; Marcus D. Hanwell -R-2.1.0-r1.ebuild, -R-2.2.0.ebuild, +R-2.2.0-r1.ebuild: Added some extra seds to get rid of temp paths, closes bug 115140. Pruned old versions. 23 Nov 2005; Marcus D. Hanwell files/digest-R-2.2.0, Manifest: Fixed bad digest, closes bug 113319. *R-2.2.0 (22 Nov 2005) 22 Nov 2005; Danny van Dyk +files/R-2.2.0-ifc-configure.patch, R-2.1.0-r1.ebuild, R-2.1.1.ebuild, +R-2.2.0.ebuild: Added version 2.2.0 with support for compilation with Intel(R) Fortran Compiler. Removed obsolete version 2.0.1. Fixed stale file Bug by running 64bit test in ${T} now. 03 Sep 2005; Markus Rothe R-2.1.1.ebuild: Stable on ppc64 02 Sep 2005; Michael Hanselmann R-2.1.1.ebuild: Stable on ppc. 22 Aug 2005; Gustavo Zacarias R-2.1.1.ebuild: Stable on sparc 22 Aug 2005; Marcus D. Hanwell -R-2.0.1.ebuild, R-2.1.1.ebuild: Removed old version. Stable on amd64 and x86. 13 Aug 2005; Danny van Dyk R-2.0.1.ebuild, R-2.1.0-r1.ebuild, R-2.1.1.ebuild: Changed SRC_URI to new 'cran' thirdparty mirror. *R-2.1.1 (01 Jul 2005) 01 Jul 2005; Danny van Dyk R-2.0.1.ebuild, R-2.1.0-r1.ebuild, +R-2.1.1.ebuild: Moved 64bit check to pkg_setup() to make fortran.eclass work again. Bumped to version 2.1.1 18 Jun 2005; Markus Rothe R-2.1.0-r1.ebuild: Stable on ppc64 17 Jun 2005; Michael Hanselmann R-2.1.0-r1.ebuild: Stable on ppc. 13 Jun 2005; Gustavo Zacarias R-2.1.0-r1.ebuild: Stable on sparc 12 Jun 2005; Marcus D. Hanwell -R-1.9.0-r1.ebuild: Removing old version. Closes bug 91512. 11 Jun 2005; Marcus D. Hanwell R-2.1.0-r1.ebuild: Stable on amd64 and x86. 07 Jun 2005; Patrick Kursawe R-2.0.1.ebuild, R-2.1.0-r1.ebuild: Added LDPATH to R libs, bug #90601 01 Jun 2005; Mike Frysinger R-1.9.0-r1.ebuild, R-2.0.1.ebuild: Change USE=bzlib to USE=bzip2. *R-1.9.0-r1 (25 May 2005) 25 May 2005; Marcus D. Hanwell +R-1.9.0-r1.ebuild: Bring back R-1.9.0-r1 until <=dev-python/rpy-0.3.5-r1 are removed from portage. 25 May 2005; Marcus D. Hanwell -R-1.9.0-r1.ebuild: Removed old version. 25 May 2005; Luca Barbato R-2.0.1.ebuild: Marked ppc 24 May 2005; Marcus D. Hanwell R-2.0.1.ebuild: Updated 64 bit detection code. 10 May 2005; Gustavo Zacarias R-2.0.1.ebuild: Stable on sparc 08 May 2005; Marcus D. Hanwell -R-1.9.1.ebuild, -R-2.0.0.ebuild, R-2.0.1.ebuild, -R-2.1.0.ebuild, R-2.1.0-r1.ebuild: Marked 2.0.1 stable on amd64 and x86, cleaned out old ebuilds. Added new 64 bit detection code to 2.1.0-r1 as per bug 91512. *R-2.1.0-r1 (29 Apr 2005) 29 Apr 2005; Marcus D. Hanwell +R-2.1.0-r1.ebuild: Get rid of obsolete USE flags, tidy up deps a little. Thanks to MATSUU Takuto in bug 67834 for the patch. 21 Apr 2005; Marcus D. Hanwell R-2.1.0.ebuild: Update deps to reflect new USE flags. *R-2.1.0 (20 Apr 2005) 20 Apr 2005; Marcus D. Hanwell +R-2.1.0.ebuild: Version bump, ebuild cleanups and some additional USE flags. Thanks to matsuu for some of the suggestions in bug 67834. *R-2.0.1 (21 Feb 2005) 21 Feb 2005; Danny van Dyk R-2.0.0.ebuild, +R-2.0.1.ebuild: Fixed a sandbox violation in R-2.0.0 (BUG #79004) and marked stabled on amd64. Added R-2.0.1 (BUG #72313). 17 Feb 2005; Bryan Østergaard R-1.9.1.ebuild: ~alpha keyword. 02 Feb 2005; Danny van Dyk R-2.0.0.ebuild: GNU Fortran 77 profile name changed to g77 in fortran.eclass 17 Nov 2004; Markus Rothe R-2.0.0.ebuild: stable on ppc64 10 Oct 2004; Danny van Dyk -R-1.8.1.ebuild, R-1.9.0-r1.ebuild, R-2.0.0.ebuild: R-2.0.0 now in testing on x86,sparc,amd64,ppc and ppc64; using new fortran.eclass. R-1.9.0-r1 stable on all arches. Removed obsolete R-1.8.1. *R-2.0.0 (07 Oct 2004) 07 Oct 2004; George Shapovalov R-2.0.0 : new version, masked with KEYWORDS="-*" to get a bit more testing 30 Sep 2004; Ferris McCormick R-1.9.0-r1.ebuild: Stable for sparc. 12 Sep 2004; Danny van Dyk R-1.9.0-r1.ebuild, R-1.9.1.ebuild: Removed f2c support for dev-lang/R on 64-bit arches. This is entirely R's fault. f2c works perfectly right. Future versions of dev-lang/R will check for this in ./configure. For R-1.9.{0,1} the ebuild checks for it. Fixes BUG #61042. *R-1.9.1 (22 Aug 2004) 09 Sep 2004; Philippe Trottier R-1.9.1.ebuild, marked ~ppc64 22 Aug 2004; Danny van Dyk -R-1.9.0.ebuild, +R-1.9.1.ebuild: Version bump to 1.9.1 (current stable). Removed obsolete 1.9.0. 06 Aug 2004; Danny van Dyk R-1.9.0-r1.ebuild: Marked stable on amd64. 11 Jul 2004; Danny van Dyk R-1.8.1.ebuild, R-1.9.0-r1.ebuild, R-1.9.0.ebuild: Fixed BUG #56616. Tidied up g77/f2c check in >=R-1.9.0. Added f2c USE flag. 01 Jul 2004; Jeremy Huddleston R-1.8.1.ebuild, R-1.9.0-r1.ebuild, R-1.9.0.ebuild: virtual/glibc -> virtual/libc 01 Jul 2004; Danny van Dyk R-1.8.1.ebuild, R-1.9.0-r1.ebuild, R-1.9.0.ebuild: Fixed BUG #55386 for amd64. Pending for rest of arches. *R-1.9.0-r1 (05 Jun 2004) 05 Jun 2004; Patrick Kursawe R-1.9.0-r1.ebuild: Added a few USE flags according to suggestions by Leo Chen 28 May 2004; Patrick Kursawe R-1.9.0.ebuild: Removing the f77 USE flag check - just giving a hint when no g77 found. 17 May 2004; Patrick Kursawe R-1.9.0.ebuild: adding f77 to IUSE 11 May 2004; Patrick Kursawe R-1.9.0.ebuild: pkg_setup checks for g77 presence now. 20 Apr 2004; Patrick Kursawe R-1.9.0.ebuild: Changed dependency - works also with current libglade, see bug #47825 *R-1.9.0 (13 Apr 2004) 13 Apr 2004; Patrick Kursawe R-1.8.1.ebuild, R-1.9.0.ebuild: Version bump, added write permission for /var/cache/fonts 01 Apr 2004; Patrick Kursawe R-1.8.0.ebuild, R-1.8.1.ebuild: 1.8.1 is stable 22 Mar 2004; Patrick Kursawe R-1.8.1.ebuild: Fixing bug #40100 (problems with newer Xfree) 25 Feb 2004; Patrick Kursawe R-1.4.1-r1.ebuild, R-1.4.1.ebuild, R-1.5.1.ebuild, R-1.6.1.ebuild, R-1.6.2.ebuild, R-1.7.0.ebuild, R-1.7.1.ebuild, R-1.8.0.ebuild, files/R-1.5.1-tcltk.diff: Big cleanup, marking 1.8.0 as stable *R-1.8.1 (17 Feb 2004) 17 Feb 2004; Patrick Kursawe R-1.8.1.ebuild: Version bump 21 Oct 2003; David Holm R-1.8.0.ebuild: Added to ~ppc. *R-1.8.0 (16 Oct 2003) 16 Oct 2003; George Shapovalov R-1.8.0 : new version (#30784), fixes gnome? dependencies thanks to kdh for an update *R-1.7.1 (19 Jun 2003) 19 Jun 2003; George Shapovalov R-1.7.1 : new version (#23012), now correctly builds tcltk support fix and update by Tristan Henderson *R-1.7.0 (29 May 2003) 29 May 2003; Grant Goodyear R-1.7.0.ebuild: Version update. Thanks to Stuart Luppescu for the heads-up. *R-1.6.2 (12 Apr 2003) 12 Apr 2003; Grant Goodyear Manifest, R-1.6.2.ebuild: Version bump *R-1.6.1 (12 Dec 2002) 12 Dec 2002; George Shapovalov R-1.6.1.ebuild : version update, patching is unnecessary now. Update subitted by Sam Wouters , see #11313 * Autoupdate keywords (12-6-02) 06 Dec 2002; Rodney Rees : changed sparc ~sparc keywords *R-1.5.1 (11 July 2002) 09 Aug 2002; George Shapovalov R-1.5.1.ebuild : fixed the wrappers: R installs two identical wrappers (R that invoke R.bin) under /usr/bin and /usr/lib/R/bin/. Only one of these was modified to have correct R_HOME_DIR Changed ebuild to modify R under /usr/lib/R/bin and symlink it into /usr/bin 11 July 2002; George Shapovalov R-1.5.1.ebuild, files/digest-R-1.5.1 : upped version new version submitted by Tristan Henderson *R-1.4.1-r1 (11 Apr 2002) 11 Apr 2002; Spider Forcing an upgrade due to libpng upgrade. *R-1.4.1 (19 Feb 2002) 19 Feb 2002; T.Neidt ChangeLog, R-1.4.1.ebuild : Initial commit. R is GNU S - A language and environment for statistical computing and graphics. Gnome and tcltk gui's are available if in USE. If gnome, a rudimentary menu entry is made under Applications. However, it has the annoying tendency to pop up a terminal window to start the gui. (todo 1) Also, the html files are not accessible from the toolbar menu entry unless you happen to be running netscape. (todo 2) This ebuild makes use of a new USE variable, 'atlas', which will compile R using the auto-tuned blas libraries provided by atlas. NOTE: atlas ebuild currently only provides static libraries. Shared libraries are in the works.