acf | autocorrelation function for time series |
as.mcmc | Markov Chain Monte Carlo Objects |
as.mcmc.list | Replicated Markov Chain Monte Carlo Objects |
as.ts.mcmc | Coerce mcmc object to time series |
autocorr | Autocorrelation function for Markov chains |
autocorr.plot | Plot autocorrelations for Markov Chains |
codamenu | Main menu driver for the coda package |
crosscorr | Cross correlations for MCMC output |
crosscorr.plot | Plot image of correlation matrix |
densplot | Probability density function estimate from MCMC output |
gelman.diag | Gelman and Rubin's diagnostic |
gelman.plot | Gelman-Rubin-Brooks plot |
geweke.diag | Geweke's convergence diagnostic for Markov chains |
geweke.plot | Geweke-Brooks plot |
heidel.diag | Heidelberger and Welch's convergence diagnostic |
is.mcmc | Markov Chain Monte Carlo Objects |
is.mcmc.list | Replicated Markov Chain Monte Carlo Objects |
mcmc | Markov Chain Monte Carlo Objects |
mcmc.list | Replicated Markov Chain Monte Carlo Objects |
multi.menu | Choose multiple options from a menu |
plot.mcmc | Summary plots of mcmc objects |
raftery.diag | Raftery Lewis diagnostic: Calculate the number of iterations required for an MCMC run |
read.and.check | Read data interactively and check that it satisfies conditions |
read.bugs | Read BUGS output files |
read.bugs.interactive | Read BUGS output files interactively |
spec.pgram | Estimate spectral density from smoothed periodogram |
summary.mcmc | Summary statistics for Markov Chain Monte Carlo chains |
summary.mcmc.list | Summary statistics for Markov Chain Monte Carlo chains |
thin | Thinning interval |
traceplot | Trace plot of MCMC output |
upgrade.mcmc | Upgrade mcmc objects in obsolete format |
window.mcmc | Time windows for mcmc objects |