Linear mixed effects library


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A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

-- A --

ACF Autocorrelation Function
ACF.gls Autocorrelation Function for gls Residuals
ACF.lme Autocorrelation Function for lme Residuals
AIC Akaike Information Criterion
AIC.gls Akaike Information Criterion
AIC.lm Akaike Information Criterion
AIC.lme Akaike Information Criterion
AIC.lmList Akaike Information Criterion
AIC.logLik AIC of a logLik Object
AIC.nlme Akaike Information Criterion
AIC.nls Akaike Information Criterion
AIC.nlsList Akaike Information Criterion
allCoef Extract Coefficients from a Set of Objects
anova.gls Compare Likelihoods of Fitted Objects
anova.lme Compare Likelihoods of Fitted Objects
as.matrix.corStruct Matrix of a corStruct Object
as.matrix.pdMat Matrix of a pdMat Object
as.matrix.reStruct Matrices of an reStruct Object
asOneFormula Combine Formulas of a Set of Objects
asOneSidedFormula Convert to One-Sided Formula
asTable Convert groupedData to a matrix
asTable.groupedData Convert groupedData to a matrix
augPred Augmented Predictions
augPred.gls Augmented Predictions
augPred.lme Augmented Predictions
augPred.lmList Augmented Predictions

-- B --

balancedGrouped Create a groupedData object from a matrix
BIC Bayesian Information Criterion
BIC.gls Bayesian Information Criterion
BIC.lm Bayesian Information Criterion
BIC.lme Bayesian Information Criterion
BIC.lmList Bayesian Information Criterion
BIC.logLik BIC of a logLik Object
BIC.nlme Bayesian Information Criterion
BIC.nls Bayesian Information Criterion
BIC.nlsList Bayesian Information Criterion

-- C --

coef.corAR1 Coefficients of a corStruct Object
coef.corARMAd Coefficients of a corStruct Object
coef.corCAR1 Coefficients of a corStruct Object
coef.corCompSymm Coefficients of a corStruct Object
coef.corHF Coefficients of a corStruct Object
coef.corIdent Coefficients of a corStruct Object
coef.corLin Coefficients of a corStruct Object
coef.corSpatial Coefficients of a corStruct Object
coef.corSpher Coefficients of a corStruct Object
coef.corStruct Coefficients of a corStruct Object
coef.corSymm Coefficients of a corStruct Object
coef.gls Extract gls Coefficients
coef.gnls Extract gnls Coefficients
coef.lme Extract lme Coefficients
coef.lmList Extract lmList Coefficients
coef.modelStruct Extract modelStruct Object Coefficients
coef.pdBlocked pdMat Object Coefficients
coef.pdCompSymm pdCompSymm Object Coefficients
coef.pdDiag pdIdent Object Coefficients
coef.pdIdent pdIdent Object Coefficients
coef.pdMat pdMat Object Coefficients
coef.pdNatural pdMat Object Coefficients
coef.pdSymm pdMat Object Coefficients
coef.reStruct reStruct Object Coefficients
coef.varComb varFunc Object Coefficients
coef.varConstPower varFunc Object Coefficients
coef.varExp varFunc Object Coefficients
coef.varFixed varFunc Object Coefficients
coef.varFunc varFunc Object Coefficients
coef.varIdent varFunc Object Coefficients
coef.varPower varFunc Object Coefficients
coef<- Assign Values to Coefficients
coef<-.corAR1 Coefficients of a corStruct Object
coef<-.corARMAd Coefficients of a corStruct Object
coef<-.corCAR1 Coefficients of a corStruct Object
coef<-.corCompSymm Coefficients of a corStruct Object
coef<-.corHF Coefficients of a corStruct Object
coef<-.corIdent Coefficients of a corStruct Object
coef<-.corLin Coefficients of a corStruct Object
coef<-.corSpatial Coefficients of a corStruct Object
coef<-.corSpher Coefficients of a corStruct Object
coef<-.corStruct Coefficients of a corStruct Object
coef<-.corSymm Coefficients of a corStruct Object
coef<-.modelStruct Extract modelStruct Object Coefficients
coef<-.pdBlocked pdMat Object Coefficients
coef<-.pdMat pdMat Object Coefficients
coef<-.reStruct reStruct Object Coefficients
coef<-.varComb varFunc Object Coefficients
coef<-.varConstPower varFunc Object Coefficients
coef<-.varExp varFunc Object Coefficients
coef<-.varFixed varFunc Object Coefficients
coef<-.varIdent varFunc Object Coefficients
coef<-.varPower varFunc Object Coefficients
collapse Collapse According to Groups
collapse.groupedData Collapse a groupedData Object
compareFits Compare Fitted Objects
comparePred Compare Predictions
comparePred.gls Compare Predictions
comparePred.lme Compare Predictions
comparePred.lmList Compare Predictions
corAR1 AR(1) Correlation Structure
corARMA ARMA(p,q) Correlation Structure
corCAR1 Continuous AR(1) Correlation Structure
corClasses Correlation Structure Classes
corCompSymm Compound Symmetry Correlation Structure
corExp Rational Quadratic Correlation Structure
corFactor Factor of a Correlation Matrix
corFactor.compSymm Factor of a corStruct Object Matrix
corFactor.corAR1 Factor of a corStruct Object Matrix
corFactor.corARMA Factor of a corStruct Object Matrix
corFactor.corCAR1 Factor of a corStruct Object Matrix
corFactor.corHF Factor of a corStruct Object Matrix
corFactor.corSpatial Factor of a corStruct Object Matrix
corFactor.corStruct Factor of a corStruct Object Matrix
corFactor.corSymm Factor of a corStruct Object Matrix
corGaus Gaussian Correlation Structure
corLin Linear Correlation Structure
corMatrix Extract Correlation Matrix
corMatrix.compSymm Matrix of a corStruct Object
corMatrix.corAR1 Matrix of a corStruct Object
corMatrix.corARMA Matrix of a corStruct Object
corMatrix.corCAR1 Matrix of a corStruct Object
corMatrix.corHF Matrix of a corStruct Object
corMatrix.corSpatial Matrix of a corStruct Object
corMatrix.corStruct Matrix of a corStruct Object
corMatrix.corSymm Matrix of a corStruct Object
corMatrix.pdBlocked Extract Correlation Matrix from a pdMat Object
corMatrix.pdCompSymm Extract Correlation Matrix from a pdMat Object
corMatrix.pdDiag Extract Correlation Matrix from a pdMat Object
corMatrix.pdIdent Extract Correlation Matrix from a pdMat Object
corMatrix.pdMat Extract Correlation Matrix from a pdMat Object
corMatrix.pdSymm Extract Correlation Matrix from a pdMat Object
corMatrix.reStruct Extract Correlation Matrix from Components of an reStruct Object
corRatio Rational Quadratic Correlation Structure
corSpatial Spatial Correlation Structure
corSpher Spherical Correlation Structure
corSymm General Correlation Structure
covariate<- Assign Covariate Values
covariate<-.varFunc Assign varFunc Covariate

-- D --

Dim Extract Dimensions from an Object
Dim.corSpatial Dimensions of a corSpatial Object
Dim.corStruct Dimensions of a corStruct Object
Dim.pdCompSymm Dimensions of a pdMat Object
Dim.pdDiag Dimensions of a pdMat Object
Dim.pdIdent Dimensions of a pdMat Object
Dim.pdMat Dimensions of a pdMat Object

-- F --

fitted.gls Extract gls Fitted Values
fitted.glsStruct Calculate glsStruct Residuals
fitted.gnls Extract gnls Fitted Values
fitted.gnlsStruct Calculate gnlsStruct Residuals
fitted.lme Extract lme Fitted Values
fitted.lmeStruct Calculate lmeStruct Fitted Values
fitted.lmList Extract lmList Fitted Values
fitted.nlmeStruct Calculate nlmeStruct Fitted Values
fixed.effects Extract Fixed Effects
fixed.effects.lme Extract lme Fixed Effects
fixed.effects.lmList Extract lmList Fixed Effects
fixef Extract Fixed Effects
fixef.lme Extract lme Fixed Effects
fixef.lmList Extract lmList Fixed Effects
formula.corStruct Extract corStruct Object Formula
formula.gls Extract gls Object Formula
formula.gnls Extract gnls Object Formula
formula.groupedData Extract groupedData Formula
formula.lme Extract lme Object Formula
formula.lmList Extract lmList Object Formula
formula.modelStruct Extract Formula from \code{modelStruct
formula.nlme Extract nlme Object Formula
formula.nls Extract Model Formula from nls Object
formula.nlsList Extract nlsList Object Formula
formula.pdBlocked Extract pdBlocked Formula
formula.pdMat Extract pdMat Formula
formula.reStruct Extract reStruct Object Formula
formula.varComb Extract varFunc Formula
formula.varFunc Extract varFunc Formula

-- G --

gapply Apply a Function by Groups
getCovariate Extract Covariate from an Object
getCovariate.corSpatial Extract corStruct Object Covariate
getCovariate.corStruct Extract corStruct Object Covariate
getCovariate.data.frame Extract Data Frame Covariate
getCovariate.varFunc Extract varFunc Covariate
getCovariateFormula Extract Covariates Formula
getData Extract Data from an Object
getData.gls Extract gls Object Data
getData.lme Extract lme Object Data
getData.lmList Extract lmList Object Data
getGroups Extract Grouping Factors from an Object
getGroups.corStruct Extract corStruct Groups
getGroups.data.frame Extract Groups from a Data Frame
getGroups.gls Extract gls Object Groups
getGroups.lme Extract lme Object Groups
getGroups.lmList Extract lmList Object Groups
getGroups.varFunc Extract varFunc Groups
getGroupsFormula Extract Grouping Formula
getGroupsFormula.default Extract Grouping Formula
getGroupsFormula.gls Extract gls Object Grouping Formula
getGroupsFormula.lme Extract lme Object Grouping Formula
getGroupsFormula.lmList Extract lmList Object Grouping Formula
getGroupsFormula.reStruct Extract reStruct Grouping Formula
getInitial get initial parameter estimates
getInitial.default get initial parameter estimates
getInitial.formula get initial parameter estimates
getInitial.selfStart get initial parameter estimates
getResponse Extract Response Variable from an Object
getResponse.data.frame Extract Response from a Data Frame
getResponse.gls Extract gls Object Response
getResponse.lme Extract lme Object Response
getResponse.lmList Extract lmList Object Response
getResponseFormula Extract Formula Specifying Response Variable
gls Fit Linear Model Using Generalized Least Squares
glsControl Control Values for gls Fit
glsObject Fitted gls Object
glsStruct Generalized Least Squares Structure
gnls Fit Nonlinear Model Using Generalized Least Squares
gnlsControl Control Values for gnls Fit
gnlsObject Fitted gnls Object
gnlsStruct Generalized Nonlinear Least Squares Structure
groupedData Construct a groupedData Object
gsummary Summarize by Groups

-- I --

initialize Initialize Object
initialize.corAR1 Initialize corStruct Object
initialize.corARMA Initialize corStruct Object
initialize.corCAR1 Initialize corStruct Object
initialize.corCompSymm Initialize corStruct Object
initialize.corHF Initialize corStruct Object
initialize.corIdent Initialize corStruct Object
initialize.corLin Initialize corStruct Object
initialize.corSpatial Initialize corStruct Object
initialize.corSpher Initialize corStruct Object
initialize.corStruct Initialize corStruct Object
initialize.corSymm Initialize corStruct Object
initialize.glsStruct Initialize a glsStruct Object
initialize.lmeStruct Initialize an lmeStruct Object
initialize.reStruct Initialize reStruct Object
initialize.varComb Initialize varFunc Object
initialize.varConstPower Initialize varFunc Object
initialize.varExp Initialize varFunc Object
initialize.varFixed Initialize varFunc Object
initialize.varFunc Initialize varFunc Object
initialize.varIdent Initialize varFunc Object
initialize.varPower Initialize varFunc Object
intervals Confidence Intervals on Coefficients
intervals.gls Confidence Intervals on gls Parameters
intervals.lme Confidence Intervals on lme Parameters
intervals.lmList Confidence Intervals on lmList Coefficients
isBalanced Check a Design for Balance
isBalanced.groupedData Check a Design for Balance
isInitialized Check if Object is Initialized
isInitialized.pdBlocked Check if Object is Initialized
isInitialized.pdMat Check if Object is Initialized
isInitialized.reStruct Check if an reStruct Object is Initialized

-- L --

lme Linear Mixed-Effects Models
lme.formula Linear Mixed-Effects Models
lme.groupedData LME fit from groupedData Object
lme.lmList LME fit from lmList Object
lmeControl Control Values for lme Fit
lmeObject Fitted lme Object
lmeScale Scale for lme Optimization
lmeStruct Linear Mixed-Effects Structure
lmList List of lm Objects with a Common Model
lmList.formula List of lm Objects with a Common Model
lmList.groupedData lmList Fit from a groupedData Object
logDet Extract the Logarithm of the Determinant
logDet.corStruct Extract corStruct Log-Determinant
logDet.pdBlocked Extract Log-Determinant from a pdMat Object
logDet.pdCompSymm Extract Log-Determinant from a pdMat Object
logDet.pdDiag Extract Log-Determinant from a pdMat Object
logDet.pdIdent Extract Log-Determinant from a pdMat Object
logDet.pdMat Extract Log-Determinant from a pdMat Object
logDet.pdSymm Extract Log-Determinant from a pdMat Object
logDet.reStruct Extract reStruct Log-Determinants
logLik Extract Log-Likelihood
logLik.corStruct Extract corStruct Log-Likelihood
logLik.gls Log-Likelihood of a gls Object
logLik.glsStruct Log-Likelihood of a glsStruct Object
logLik.gnls Log-Likelihood of a gnls Object
logLik.gnlsStruct Log-Likelihood of a gnlsStruct Object
logLik.lm Extract Log-Likelihood from an lm Object
logLik.lme Log-Likelihood of an lme Object
logLik.lmeStruct Log-Likelihood of an lmeStruct Object
logLik.lmeStructInt Log-Likelihood of an lmeStruct Object
logLik.lmList Log-Likelihood of an lmList Object
logLik.reStruct Calculate reStruct Log-Likelihood
logLik.varComb Extract varFunc logLik
logLik.varFunc Extract varFunc logLik

-- M --

matrix<- Assign Matrix Values
matrix<-.pdBlocked Assign Matrix to a pdMat Object
matrix<-.pdMat Assign Matrix to a pdMat Object
matrix<-.reStruct Assign reStruct Matrices
model.matrix.reStruct reStruct Model Matrix

-- N --

Names Names Associated with an Object
Names.formula Extract Names from a formula
Names.pdBlocked Names of a pdBlocked Object
Names.pdMat Names of a pdMat Object
Names.reStruct Names of an reStruct Object
Names<- Names Associated with an Object
Names<-.pdMat Names of a pdMat Object
Names<-.reStruct Names of an reStruct Object
needUpdate Check if Update is Needed
needUpdate.default Check if Update is Needed
needUpdate.modelStruct Check if \code{modelStruct
needUpdate.varComb Check if Update is Needed
needUpdate.varIdent Check if Update is Needed
nlme Nonlinear Mixed-Effects Models
nlme.formula Nonlinear Mixed-Effects Models
nlme.nlsList NLME fit from nlsList Object
nlmeControl Control Values for nlme Fit
nlmeObject Fitted nlme Object
nlmeStruct Nonlinear Mixed-Effects Structure
nlsList List of nls Objects with a Common Model
nlsList.formula List of nls Objects with a Common Model
nlsList.selfStart nlsList Fit from a selfStart Function
NLSstClosestX Find the x with the closest y
NLSstClosestX.sortedXyData Find the x with the closest y
NLSstLfAsymptote Guess the horizontal asymptote on the left side
NLSstLfAsymptote.sortedXyData Guess the horizontal asymptote on the left side
NLSstRtAsymptote Guess the horizontal asymptote on the right side
NLSstRtAsymptote.sortedXyData Guess the horizontal asymptote on the right side

-- P --

pairs.compareFits Pairs Plot of compareFits Object
pairs.lme Pairs Plot of an lme Object
pairs.lmList Pairs Plot of an lmList Object
pdBlocked Positive-Definite Block Diagonal Matrix
pdClasses Positive-Definite Matrix Classes
pdCompSymm Positive-Definite Matrix with Compound Symmetry Structure
pdConstruct Construct pdMat Objects
pdConstruct.pdBlocked Construct pdBlocked Objects
pdConstruct.pdCompSymm Construct pdMat Objects
pdConstruct.pdDiag Construct pdMat Objects
pdConstruct.pdIdent Construct pdMat Objects
pdConstruct.pdMat Construct pdMat Objects
pdConstruct.pdNatural Construct pdMat Objects
pdConstruct.pdSymm Construct pdMat Objects
pdDiag Diagonal Positive-Definite Matrix
pdFactor Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdBlocked Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdCompSymm Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdDiag Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdIdent Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdMat Square-Root Factor of a Positive-Definite Matrix
pdFactor.pdNatural Square-Root Factor of a Positive-Definite Matrix
pdFactor.reStruct Extract Square-Root Factor from Components of an reStruct Object
pdIdent Multiple of the Identity Positive-Definite Matrix
pdMat Positive-Definite Matrix
pdMatrix Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdBlocked Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdCompSymm Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdDiag Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdIdent Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdMat Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.pdSymm Extract Matrix or Square-Root Factor from a pdMat Object
pdMatrix.reStruct Extract Matrix or Square-Root Factor from Components of an reStruct Object
pdNatural General Positive-Definite Matrix in Natural Parametrization
pdSymm General Positive-Definite Matrix
plot.ACF Plot an ACF Object
plot.augPred Plot augPred Object
plot.compareFits Plot a compareFits Object
plot.gls Plot a gls Object
plot.intervals.lmList Plot lmList Confidence Intervals
plot.lme Plot an lme Object
plot.lmList Plot an lmList Object
plot.nffGroupedData Plot an nffGroupedData Object
plot.nfnGroupedData Plot an nfnGroupedData Object
plot.nmGroupedData Plot an nmGroupedData Object
plot.ranef.lme Plot a ranef.lme Object
plot.ranef.lmList Plot a ranef.lmList Object
plot.simulate.lme simulate lme models
plot.Variogram Plot a Variogram Object
pooledSD Extract Pooled Standard Deviation
predict.gls Predictions from a gls Object
predict.gnls Predictions from a gnls Object
predict.lme Predictions from an lme Object
predict.lmList Predictions from an lmList Object
predict.nlme Predictions from an nlme Object
print.anova.lme Print an anova.lme Object
print.corHF Print a corStruct Object
print.corStruct Print a corStruct Object
print.corSymm Print a corStruct Object
print.gls Print a gls Object
print.groupedData Print a groupedData Object
print.intervals.gls Print an intervals.gls Object
print.intervals.lme Print an intervals.lme Object
print.lme Print an lme Object
print.lmList Print an lmList Object
print.modelStruct Use \code{print
print.pdMat Print a pdMat Object
print.reStruct Print an reStruct Object
print.summary.corStruct Print a summary.corStruct Object
print.summary.gls Print a summary.gls Object
print.summary.lme Print a summary.lme Object
print.summary.lmList Print a summary.lmList Object
print.summary.modelStruct Use \code{print
print.summary.pdMat Print a summary.pdMat Object
print.summary.varComb Print a summary.varFunc Object
print.summary.varFixed Print a summary.varFunc Object
print.summary.varFunc Print a summary.varFunc Object
print.varComb Print a varFunc Object
print.varFunc Print a varFunc Object
pruneLevels Prune Factor Levels
pruneLevels.factor Prune Factor Levels
pruneLevels.ordered Prune Factor Levels

-- Q --

qqnorm.gls Normal Plot of Residuals from a gls Object
qqnorm.lme Normal Plot of Residuals or Random Effects from an lme Object

-- R --

random.effects Extract Random Effects
random.effects.lme Extract lme Random Effects
random.effects.lmList Extract lmList Random Effects
ranef Extract Random Effects
ranef.lme Extract lme Random Effects
ranef.lmList Extract lmList Random Effects
recalc Recalculate Condensed Linear Model Object
recalc.corAR1 Recalculate for corStruct Object
recalc.corARMA Recalculate for corStruct Object
recalc.corCAR1 Recalculate for corStruct Object
recalc.corCompSymm Recalculate for corStruct Object
recalc.corHF Recalculate for corStruct Object
recalc.corIdent Recalculate for corStruct Object
recalc.corSpatial Recalculate for corStruct Object
recalc.corStruct Recalculate for corStruct Object
recalc.corSymm Recalculate for corStruct Object
recalc.modelStruct Recalculate Condensed Linear Model for a \code{modelStruct
recalc.reStruct Recalculate for an reStruct Object
recalc.varFunc Recalculate for varFunc Object
residuals.gls Extract gls Residuals
residuals.glsStruct Calculate glsStruct Residuals
residuals.gnls Extract gnls Residuals
residuals.gnlsStruct Calculate gnlsStruct Residuals
residuals.lme Extract lme Residuals
residuals.lmeStruct Calculate lmeStruct Residuals
residuals.lmList Extract lmList Residuals
residuals.nlmeStruct Calculate nlmeStruct Residuals
reStruct Random Effects Structure

-- S --

selfStart Construct Self-starting Nonlinear Models
selfStart.default Construct Self-starting Nonlinear Models
selfStart.formula Construct Self-starting Nonlinear Models
simulate.lme simulate lme models
solve.pdBlocked Calculate Inverse of a Positive-Definite Matrix
solve.pdDiag Calculate Inverse of a Positive-Definite Matrix
solve.pdIdent Calculate Inverse of a Positive-Definite Matrix
solve.pdMat Calculate Inverse of a Positive-Definite Matrix
solve.pdNatural Calculate Inverse of a Positive-Definite Matrix
solve.reStruct Apply Solve to an reStruct Object
sortedXyData Create a sortedXyData object
sortedXyData.default Create a sortedXyData object
splitFormula Split a Formula
SSasymp Asymptotic Regression Model
SSasympOff Alternative Asymptotic Regression Model with an Offset
SSasympOrig Asymptotic Regression Model through the Origin
SSbiexp Biexponential model
SSfol First-order Compartment Model
SSfpl Four-parameter Logistic Model
SSlogis Logistic model
SSmicmen Michaelis-Menten model
summary.corAR1 Summarize \code{corStruct
summary.corARMA Summarize \code{corStruct
summary.corCAR1 Summarize \code{corStruct
summary.corCompSymm Summarize \code{corStruct
summary.corExp Summarize \code{corStruct
summary.corGaus Summarize \code{corStruct
summary.corHF Summarize \code{corStruct
summary.corIdent Summarize \code{corStruct
summary.corLin Summarize \code{corStruct
summary.corSpher Summarize \code{corStruct
summary.corStruct Summarize \code{corStruct
summary.corSymm Summarize \code{corStruct
summary.gls Summarize a gls Object
summary.lme Summarize an lme Object
summary.lmList Summarize an lmList Object
summary.modelStruct Summarize \code{modelStruct
summary.nlsList Summarize an nlsList Object
summary.pdBlocked Summarize a pdMat Object
summary.pdCompSymm Summarize a pdMat Object
summary.pdDiag Summarize a pdMat Object
summary.pdIdent Summarize a pdMat Object
summary.pdMat Summarize a pdMat Object
summary.pdNatural Summarize a pdMat Object
summary.varComb Summarize varFunc Object
summary.varConstPower Summarize varFunc Object
summary.VarCorr.lme Extract variance and correlation components
summary.varExp Summarize varFunc Object
summary.varFixed Summarize varFunc Object
summary.varFunc Summarize varFunc Object
summary.varIdent Summarize varFunc Object
summary.varPower Summarize varFunc Object

-- U --

update.gls Update a gls Object
update.gnls Update a gnls Object
update.groupedData Update a groupedData Object
update.lme Update an lme Object
update.lmList Update an lmList Object
update.modelStruct Update Elements of \code{modelStruct
update.nlme Update an nlme Object
update.nlsList Update an nlsList Object
update.varComb Update varFunc Object
update.varConstPower Update varFunc Object
update.varExpon Update varFunc Object
update.varFunc Update varFunc Object
update.varPower Update varFunc Object

-- V --

varClasses Variance Function Classes
varComb Combination of Variance Functions
varConstPower Constant Plus Power Variance Function
VarCorr Extract variance and correlation components
VarCorr.lme Extract variance and correlation components
varExp Exponential Variance Function
varFixed Fixed Variance Function
varFunc Variance Function Structure
varIdent Constant Variance Function
Variogram Calculate Semi-variogram
Variogram.corExp Calculate Semi-variogram for a corExp Object
Variogram.corGaus Calculate Semi-variogram for a corGaus Object
Variogram.corLin Calculate Semi-variogram for a corLin Object
Variogram.corRatio Calculate Semi-variogram for a corRatio Object
Variogram.corSpatial Calculate Semi-variogram for a corSpatial Object
Variogram.corSpher Calculate Semi-variogram for a corSpher Object
Variogram.default Calculate Semi-variogram
Variogram.gls Calculate Semi-variogram for Residuals from a gls Object
Variogram.lme Calculate Semi-variogram for Residuals from an lme Object
varPower Power Variance Function
varWeights Extract Variance Function Weights
varWeights.glsStruct Variance Weights for glsStruct Object
varWeights.lmeStruct Variance Weights for lmeStruct Object
varWeights.varComb Extract Variance Function Weights
varWeights.varFunc Extract Variance Function Weights